In case you haven’t seen it, at Ignite in September we introduced the concept of co-management with Configuration Manager and Intune both managing the same device. https://channel9.msdn.com/Events/Ignite/2016/BRK2138-TS
If you already have ConfigMgr, it makes sense for now to consider this configuration to address app deployment.
An error occurred while saving the commentAnonymous commented
Can you share the trick to deploy Application using cmd, bat, ps1?